Haussler Lab

Center for Biomolecular Science & Engineering: Promoting discovery and invention in the post-genomic age

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David Haussler
haussler@soe.ucsc.edu
(831) 459-2105
fax (831) 459-1809
501 Engineering 2

Assistant
Vege Clerisse
(831) 459-1544
veegee@soe.ucsc.edu

Classes taught by David Haussler

Haussler main page

All titles (pdf)

Papers from UCSC
Genome Bioinformatics Group since 2001

Selected early papers

Postdocs

Research collaborators

Research staff

	Graduate students

	Affiliations

	Resources

	Research Projects

HAUSSLER GROUP PHOTOS

Haussler research group

Haussler postdocs and graduate students

Wet lab group

People

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	POSTDOCS Andrew Kern Population genomics and molecular evolution. Andrew's web page Jian Ma Ancestral genome reconstruction and genome evolution Benedict Paten Ancestral genome reconstruction, sequence analysis, and molecular evolution; further development of the genome alignment tools Pecan and Ortheus Jason Underwood Applying biochemical and cellular approaches to investigating the role of conserved non-coding regions of the vertebrate genome with emphasis on regions that may encode structured RNAs Ting Wang Developing and utilizing computational algorithms to explore gene regulation and functionality of the conserved elements of the genome; testing hypotheses thus generated with functional assays in the wet lab Jing Zhu Comparative genomic analysis of the malaria and mammalian genomes

	UCSC RESEARCH COLLABORATORS Jim Kent kent@soe.ucsc.edu Genome browser research and development Mark Akeson makeson@chemistry.ucsc.edu Nanopore technology for the analysis of single RNA and DNA molecules Manny Ares ares@biology.ucsc.edu Alternative splicing David Feldheim feldheim@biology.ucsc.edu Neurodevelopment Josh Stuart jstuart@soe.ucsc.edu Gene networks

	WET LAB RESEARCH STAFF Sofie Salama Translational research—exploratory wet-lab validation of computational predictions Robert Sellers Laboratory Manager Andre Love Cell Culture Research Technician Bryan King Research Technician MORE... View photos from our lab


	GRADUATE STUDENTS Robert Baertsch baertsch@soe.ucsc.edu; Processed pseudogenes and mammalian synteny/orthology relationships (read about Robert's work on the SARS genome) Mark Diekhans markd@soe.ucsc.edu Computational gene finding, UCSC Mammalian Gene Collection project (read about Mark's work on the Consensus Coding Sequence gene set in UCSC Currents) David Greenberg greenberg@biology.ucsc.edu Characterizing the biological function in mammalian brain development of genome regions that show accelerated changes in humans Sol Katzman katzman@ieee.org Recent positive selection in the evolution of the human genome Craig Lowe lowec@soe.ucsc.edu Contributions of mobile elements to the human genome Courtney Onodera conodera@soe.ucsc.edu Gene regulation, distal enhancers, human ultraconserved elements Brian Raney braney@soe.ucsc.edu Using alignments of existing mammals to reconstruct the mammalian ancestor's genome Krishna Roskin krish@soe.ucsc.edu Mammalian comparative genomics focusing on conserved, non-coding regions (read about Krishna in the HHMI Bulletin) Zack Sanborn jsanborn@soe.ucsc.edu Using ancestral genomes to computationally identify gene losses that occurred during primate evolution Bernard Suh bsuh@soe.ucsc.edu Genome evolution and chromosomal rearrangements

	Affiliations

	Center for Biomolecular Science & Engineering Howard Hughes Medical Institute UCSC Biomolecular Engineering Department Bioinformatics & Computational Biology at UCSC California Institute for Quantitative Biosciences (QB3)

	Resources

	UCSC Genome Browser UCSC Bioinformatics Research Projects

	Research Projects

	UCSC Genome Browser Funded by HHMI, NHGRI, NCI, and QB3 ENCODE Funded by NHGRI NISC comparative genomes Funded by NHGRI Mammalian gene collection Funded by NCI Translational research—exploratory wet-lab validation of computational predictions Funded by HHMI



	Center for Biomolecular Science & Engineering Engineering 2, Suite 501, Mail Stop CBSE/ITI UC Santa Cruz, Santa Cruz, CA 95064 phone (831) 459-1544 • fax (831) 459-1809 cbseweb@soe.ucsc.edu Questions about the UCSC Genome Browser? Email genome@soe.ucsc.edu
© January 2005, CBSE Updated 5/2008